YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77996470, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALKIGSLEI RWYGVLMAIS VLIGTYLALK EAKRKNIHED HIYNLVLLGA PIGWIGARIW  60
   61 YVLWNWDYYS KYPAEIPAIW HGGLAFHGGI LAAILVGIVY ARMKKQSFWQ LADLFAPSII 120
  121 LGQAIGRWGN YFNQEAYGYP TDLPWAMYID GAWRHPTFLY ESLWDLGVFV YLWQTRKKQR 180
  181 YSGEIFLKYL LWYSVGRFIV EGFRVDSFWV GPFRLEQLLS VGLIVFSLIM MRVLGRNEGE 240
  241 N

Type	Start	End	Confidence
Non-Cytoplasmic	1	9	0.91
Transmembrane Helix	10	29	0.93
Cytoplasmic	30	40	0.94
Transmembrane Helix	41	62	0.93
Non-Cytoplasmic	63	77	0.94
Transmembrane Helix	78	101	0.89
Cytoplasmic	102	108	0.86
Transmembrane Helix	109	129	0.84
Non-Cytoplasmic	130	152	0.88
Transmembrane Helix	153	173	0.80
Cytoplasmic	174	184	0.83
Transmembrane Helix	185	205	0.73
Non-Cytoplasmic	206	214	0.72
Transmembrane Helix	215	235	0.88
Cytoplasmic	236	241	0.88