YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78044310, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.72
Topology Confidence:	0.39
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFIFAGFGG QGIMAMGMLL AHAAIKEGFN SSFIPSYGPE MRGGTANCSV VIEKEFIASP  60
   61 VVTEPDVLVA MNYPSLLKFK DTVKKGGHLF INSSLIPSIP EIKSDIHIHQ IPANELALKI 120
  121 GESRASNMVM LGAVLAVTNL ISLETATLNL SYIFKNKPEV LAVNEKALKT GFQSLKVI

Type	Start	End	Confidence
Cytoplasmic	1	4	0.39
Transmembrane Helix	5	25	0.62
Non-Cytoplasmic	26	178	0.69