YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77996379, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKISRREFL KFASFTAATL GLSQSVPEVA YALENAAKGQ PPVIWIQGAS CTGCSVSLLN  60
   61 SVHPDIKEIL LEIINLKFHP NISAATGHVA VEAFLGEAEK NKGKFFLVVE GAVPTKDNGV 120
  121 YCSIGEKDGR ELYFSEVVKE LGEKAKAVIA IGTCAAFGGI PAADPNPTGC VPVTEVIDPK 180
  181 KVLNIPGCPP HPDWFVGSLA HVLLYNELPK TDKFGRPKMF YEGIIHDNCP RRQYFDNSIF 240
  241 AKDFSEPGCL LLLGCKGPVT HSDCPTRLWN GGVNWCIKAG HPCIGCTEPG FPDKTGPIYE 300
  301 KMPEIKLPGI SASADTFGEV VGAATAIGLG AHLIGNIATG RLGGHKKKKK EGEE

Type	Start	End	Confidence
Signal Peptide	1	32	0.95
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	354	0.95