YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77996335, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKNLIIFYF TAAGETLARR FLTLKLGGNV TLFSGKSAEI KNCLKKNWNN DTAFLFIGAL  60
   61 GIAVRLIAPF IKDKFSDPAV VVADETGKYF ISVLSGHFGG ANEICQLLAQ KLGGEAVITT 120
  121 ATDVQGKVGL DVLARKYVLR YADREVFKRV NAALARGEEV KFFARSLPSD FPYPYLAEIE 180
  181 EEFSGIKVLI SPYLIALKPN EYQLYPPAVW VGIGCRRGVE FTLLEKAVLE ALQEGGVSLK 240
  241 GVAGIASIDL KKDETALLEL AAKYGLKTKF FTREELLEVI NKKNLQQSSK VLTKVGVGNV 300
  301 CEAAAIKAAG MGNLILPKKI FPKVSVALAE ALRWWE

Type	Start	End	Confidence
Signal Peptide	1	18	0.56
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	336	0.96