YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78044176, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELKWSVVIE SLPLLAEGAL VTLKITVIAV TLGSIIGLFA GLMRIARNPL LKFIARVYVD  60
   61 FIRGTPLLVQ IFIIYYGFPQ LWAALTGGQP HAISPWAAAI ASTSINSGAY VAEIFRAGIQ 120
  121 SIDRGQMEAA RSLGMTYGQA MRYVILPQAF KRVIPPLGNE FIAMLKDTSL LSVIGFEELA 180
  181 RRGALIIGYN ARAFEVWFAV AILYLIMTLL ISQLVSYTER RLKTGDHH

Type	Start	End	Confidence
Non-Cytoplasmic	1	20	0.91
Transmembrane Helix	21	43	0.92
Cytoplasmic	44	58	0.84
Transmembrane Helix	59	79	0.84
Non-Cytoplasmic	80	91	0.77
Transmembrane Helix	92	114	0.79
Cytoplasmic	115	192	0.65
Transmembrane Helix	193	215	0.85
Non-Cytoplasmic	216	228	0.56