YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78044170, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRYLIPLLL CLLTLPVKVH GEIKAKAYYF FIPTTNQIIE AKNQDFPLPP ASTTKIATAL  60
   61 TALDLYPRNF TLTVKPEAVR VTGTKIYLKP NEKIAVIDLV YGLMLESGND AANALAWVVG 120
  121 KENFMLILNY YLKQMGLTSV SFKNPSGLSA PGHKISAKDL CVLTFYALLK DEFADICKTK 180
  181 QYEAQSGFKP RVFHNTNRLL AVDSRVIGVK TGTTNEAGKC LVGAWRGNSF LIGTVLNCPD 240
  241 RFTAVYKTFK TTDEKLREKV IWSKGQKMYF KKNNWWTLTK DVKIFSVGNE HKLVKVVIED 300
  301 SDSFVRALFF LNGAFLAEQN LQKVR

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	325	0.99