YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78044034, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKTYYYNHK TNTMEHDVDL SRLAELLADP ESMLWVDLYN FEEKELYYLA RIFNFHELTV  60
   61 EDCLTFSPRA KVDKYENYYF FLLHALRYDE EQDEEILLVQ LGVYLGTNFI VTVHKSALPS 120
  121 LGKLALVCRR SSEICVKGTE YFLYSIIDGI VDEYFPILEQ VTNRIEDLED EIYEQPNREI 180
  181 TDEFIDLKRT ILAIRRAISH QKRIFGNLIR PPFPLSEEIK PYFSDLADHL ERATDTVDSQ 240
  241 RDMLDQILMT YNSIITTRTN ETMRVLTIIS TIFMPLTFVT GFFGMNVPFP AQNHYISTGI 300
  301 ITAGLIAISY GMVRWFKYKN WM

Type	Start	End	Confidence
Cytoplasmic	1	264	0.97
Transmembrane Helix	265	285	0.94
Non-Cytoplasmic	286	293	0.81
Transmembrane Helix	294	316	0.89
Cytoplasmic	317	322	0.93