YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77996065, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHKVAVVMGS DSDWEIVKKA VEVLKEFGVE YEVKVASAHR TPDKALNFAR TAREKGFGVI  60
   61 IAAAGMAAHL PGVLAAVTTL PVIGLPIKAS IEGIDSLLSI AQMPPGVPVA TVGINAAKNA 120
  121 GLLAVQILSL NDKNLAGKLQ AYKEKLAREV EEKEQKLLEK LF

Type	Start	End	Confidence
Cytoplasmic	1	56	0.89
Transmembrane Helix	57	78	0.86
Non-Cytoplasmic	79	162	0.61