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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77996042, gi|...
Protein type: Transmembrane
Type Confidence: 0.70
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGIKGRYFY LTLLLVLPLV VQGTVMYYFL YLEIPELSEK NLTYVAVHMA KEIEKDLTDI  60
   61 DINNLEIAEL NEINLILTHF PDMMISFIKY PNLEIIAHYS NKNGKLAKDN EIIGGVLTGE 120
  121 VKDIIIKKRY PYFGKLSLAD GKAYVYLQPV YVKGELVGFV LTHQNRNYLS VVVGEILRLT 180
  181 GTVLFLMLLV GIGYSLHYVF LNDRRTIALT KSNWDLQRKL NAVLENAQTG IVLVDRDLTI 240
  241 TYINPMAEDF FKISFAEAVG KQYDEFIKSY IITDEEKKSS FLVHTLKTGN TVYKKTITFK 300
  301 VLGEMRLGEV CTGIIQNNLG QIDGAFLFIQ DITDKRQKEE LAAKTLQLAA AGEIMSELTH 360
  361 ELKNAFMVLT GLSKLCQDGR PELKMLDEEI NRLYRLTTDF LSLTRAYRAK KERFDFQQLV 420
  421 VEVLALVDKE ARKQKVKIET FLHYPPYLKG DRNLLKQALL NVLLNAVEAM EGGGVLKVYL 480
  481 DYNVKSQEIV LTVADSGPGI PPEILQKICQ PFFTTKERGT GLGLPFTKRV VEYHLGKLMI 540
  541 KSEVGKGTWV IITLPVEENI HEKVQVV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle