YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77996040, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNTVLFEQN GKVGIITLNR PEAVNAINEE MQVEMAEILL QVKNNENIRA VVLTGAGPGF  60
   61 CAGGDVKRML SNFAKTPADQ RVTLMENLVH NWLTLLINME KPVISAVHGY AVGAGLSIAL 120
  121 ATDIIIAARS TIFSLAFAQV GLLPDLSGLF FLARTLGVHR AKELIFTADR FSAEKAYELG 180
  181 LVNRVVDDDL YLDEAMNLAK QLADGPTRAY GYAKKLLHLA TSLDLNTFFE YERLYQSLVA 240
  241 ETEDFREGVN AFIEKRPPKF KGR

Type	Start	End	Confidence
Cytoplasmic	1	105	0.93
Transmembrane Helix	106	127	0.89
Non-Cytoplasmic	128	134	0.75
Transmembrane Helix	135	156	0.82
Cytoplasmic	157	263	0.89