YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78043847, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPIWKGFIA FGLVSIPVKL YPATESKSIS FSLIHQNCGG PIHYKKFCAV CNREVSPEEI  60
   61 TKGYEFSKGQ FVTFTEEELE ALPKLKGRKI EILDFVNLAE VDPIYLQKSY YLTPSEGGEK 120
  121 PYALLMQALK DSKKIAIAKM VLRTKENIAM VRVFKEQVLT VSTIFYPDEI RKFEILEIPE 180
  181 EIPVEERELS MAKMLIDSLT TPFNPEKYKD TYREALMEVI EKKIQHEAIV IPEEKVPAKV 240
  241 IDLTEALRLS LEKITGEKVG A

Type	Start	End	Confidence
Signal Peptide	1	22	0.59
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	261	0.99