YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78043824, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRRQHEEKK PNHERWLITY ADMITLLMVF FIVMYALSNV DANKFRALAE SLSKALGGGG  60
   61 IVLTNAGPDV VTGSNATVQG NLGKASQEQL PAVDEKDLKE TANLALIKAK VDSYIKAKGL 120
  121 NASVTATLEE RGVVISFKDA ILFKLGSAEL TPQAKAIVRQ IGEILLPLPN YIRIEGHTDN 180
  181 LPINTSRFPS NWELSTARAT SVVHELIDGL HFPPYRLSAV GYGEYRPKVP NTSEQNRQKN 240
  241 RRVDIVILRS KYEPVEPKSG KVPGQN

Type	Start	End	Confidence
Cytoplasmic	1	15	0.98
Transmembrane Helix	16	37	0.94
Non-Cytoplasmic	38	266	0.95