YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77995806, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRKVFAAFL LFLFIFIFSG CTPSSSSSSI LVLEYHGVVP DNAWGKVNHL YNIRVETFEN  60
   61 QIKTLLNAGY KPISAEKLID FYYNGYKPSG KEFLITFDDG YRNNYLYAFP ILKKYRIPAE 120
  121 INLIVARIDQ AKNHNDPIKG YLNWAEVREM AKSGLIYFGS HTYDSHNKVI TGKNKKKNYP 180
  181 FLGPIYLANQ KRMETWQEAE KRVNKDLMLS VEHISYETGI RPEIFCYPHG NYNTWFISRL 240
  241 KENGFKIALA GNIPQNNNPF TVKRILVTDS LRGKILLMKL NLVKYSNILD FIIKKASGSA 300
  301 QKPDFSKT

Type	Start	End	Confidence
Signal Peptide	1	28	0.96
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	308	0.99