YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78043662, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.63
Topology Confidence:	0.29
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYLESVEQLV NEAKKLGQTL GGTALLLEAK DRDVPEEELI AIMQKRLLVM KEAISEGLTG  60
   61 KPSVGGLVGG QAVKYKKRLD EGKNLALGVF GKAITYALAV SEANASMGLI VAAPTAGSAG 120
  121 VLPGVLLSLM EEYSIPEEKV VEGLYAAGAV GVVIAHKASL SGAQGGCQAE CGSAAAMAAV 180
  181 AAAELMGGTP EQAVHAGAIA LKGMLGLVCD PVAGLVEVPC VKRNVAAAVQ ALAAADMALA 240
  241 GIVSAIPFDE VIDAMGEIGR ALPVSLKETA LGGLAATPTG KVISAKIYKQ NLIGNKW

Type	Start	End	Confidence
Cytoplasmic	1	83	0.59
Transmembrane Helix	84	100	0.29
Non-Cytoplasmic	101	297	0.61