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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77995682, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKVLGKKFS LLTLLILFSL FINGCASFTL SAKDFDKLYN LQQSSAIYDK NGRFLTQISG  60
   61 SERRTYVKID ELPPYVPQAF VAIEDARFYQ HFGIDIVGIL RAFVVNILKQ DLAQGASTIT 120
  121 QQLVRNVYLT QEKTFARKIK EALLAIQLER VYTKKEILEM YLNVIYFGNG NYGIEEAAQN 180
  181 YFGKPASKLT LGEAAMLAGI PRRPNYYAPT INYDAAVSRK NLVLDKMVEQ GYITQEEAEK 240
  241 AKREEIKINP KAQNQGNQYA AVIDKILQES EEDFGLSREQ LNTGGYKIYT TIDREIQRYA 300
  301 EKVFANAQNF PPNTDEILVQ GAAAGVDPET GGIVFLIGGR NYGRFGGFNR SFMMYRQPGS 360
  361 AFKPIVDYAP AFEKGYLPSD FIVDEPVVFG DYKPKNFDGA YHGRVTLRKA LVESLNVPAV 420
  421 KLLNEIGVDT GYEYAQRFGF ELTAKDKNLS LALGGLERGA SPLQMAAAYA VFANGGIYRT 480
  481 PHIITKIIDK DGNEIPRKNA LEEKRVISEE TAYLITDVLV DTVKKGTARR ANFGGVLAAK 540
  541 TGTTEVPFKT PGQKGTKDAW IVGYTPDISV AVWMGYDKTD RFHYLRGVTG GSYPAVILRK 600
  601 IVSYFVQLHG EKPFTIPGNL VRVSIDEKTG LIAGPLTPSG QVVDEVFPKG KEPKSISPET 660
  661 PPNPATQNSN LTAVYVEGKG VVLSWQPKPG YTYQIYRINE DSSTFMVGES STGSFADTQV 720
  721 TPGSHYQYYL LPIQKRKDGG MKMELPTSPV AIDIPVSITS EVY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle