YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78043559, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKFGALFLV VVLTLGLILT ACGNKQAEQT NSAQNQEQKQ EQKQKIVVAS DTSYAPFEFQ  60
   61 DPSTGKYVGF DMDLIQAIGE AVGFEVEIKS MNFDGVLTSV QSGTVDAAIS AISITDKRKE 120
  121 VMNFSEPYYD SGLAIVVKGD NNTIKGIDDL KGKRVAVQIA TTGADYANEL KAKGIVKEVK 180
  181 TFNTLPDALM ELRNNGVDAV INDWPVNAYY IKQSFSDLKM VGDKLTGESY GIAVPKSKPE 240
  241 ILAKINEGLK KVKESGKYAE IYEKWFGEKP KN

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	272	0.99