YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MRAY_CARHZ
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.94
Transmembrane Helix	7	29	0.91
Cytoplasmic	30	49	0.94
Transmembrane Helix	50	70	0.95
Non-Cytoplasmic	71	77	0.71
Transmembrane Helix	78	97	0.93
Cytoplasmic	98	112	0.92
Transmembrane Helix	113	133	0.93
Non-Cytoplasmic	134	153	0.88
Transmembrane Helix	154	174	0.91
Cytoplasmic	175	181	0.75
Transmembrane Helix	182	201	0.93
Non-Cytoplasmic	202	206	0.81
Transmembrane Helix	207	224	0.97
Cytoplasmic	225	231	0.81
Transmembrane Helix	232	252	0.91
Non-Cytoplasmic	253	258	0.73
Transmembrane Helix	259	283	0.86
Cytoplasmic	284	303	0.91
Transmembrane Helix	304	323	0.92
Non-Cytoplasmic	324	325	0.80

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVITKGVTAL LVSFFVALGG GRVLIPWLLK LKIGQTVRTE GPKRHLKKSG TPTMGGIIFL  60
   61 LSLVVTVVVF QAFDAKTLLL LITTLLFGLL GFLDDYLKVV LRRPLGLRAR EKLLGQVIFS 120
  121 LVLTFGAVAF LGRGTDWYIP FSRLLLGEPR YLELGNVFFF AATIFIMVGF ANAVNLTDGV 180
  181 DGLCSSVTLI VMSFFAMTSL ALKEKGLFIF ALALMGGLVG FLVYNRHPAK VFMGDTGSLA 240
  241 LGAAVAGFAV LTQTELFLLL VGLIYVVETL SVIIQVIVYQ LTGKRVFKMS PLHHHFELSG 300
  301 WSENKIVLVF SLVTLIMVLI SGYGL