YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77995539, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.71
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSIEKIKQS LKEQKSLLIG LCFFILVYVI GLTHPQTIQE KEDNAVNKTT TTQKQEQQST  60
   61 SEFVPAIVVR IHDGETITVQ LPDGAKEKVR LIGIDAPVED TLINLSSKDP AKLTLADLWG 120
  121 KTVYLEKDAV NRDSNGYLLR YVWLEIPDIK PNVISDSEVQ KKMVNAILLL NGYGKYISTS 180
  181 PNKKYESELA RSEFEAFAHK KGIWSISTAP HAPPDSNKSV KKQNIIVYVT LTGHKYHRSW 240
  241 CRYLKYSKIP ISLGDAINEG YEPCSVCNPP Q

Type	Start	End	Confidence
Cytoplasmic	1	15	0.68
Transmembrane Helix	16	34	0.67
Non-Cytoplasmic	35	271	0.99