YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78043374, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPFLLTKEGI VLREKSLWIK IYEGLEDYLS GGLLYSGLTL IFVNVLLRYV FGKPIALLDE  60
   61 YSVYLIVWGA MIGFATALRD DHHIKVNILY DRLSPKGKRI VSIFANSVGA FFAILMLIYG 120
  121 IKLVVTYKVL GQGSADSQTP LWIVSLVLPI SGFMMVVRFV EKVFLLLKKD TWQKLIQSKE 180
  181 VGL

Type	Start	End	Confidence
Cytoplasmic	1	27	0.91
Transmembrane Helix	28	51	0.83
Non-Cytoplasmic	52	60	0.80
Transmembrane Helix	61	79	0.90
Cytoplasmic	80	99	0.93
Transmembrane Helix	100	121	0.94
Non-Cytoplasmic	122	138	0.91
Transmembrane Helix	139	160	0.91
Cytoplasmic	161	183	0.96