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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77995279, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKYKNTKQK NKKSFTGELL GIFLMLLGMI GVVSIFSDKT GSIGLFFRHW FTVFAGQGSF  60
   61 LLPLIIFAIG FKLSFGHTIK HFGKKEAGLL VLVAAFLIFL TIKLPLSVMF TMAWQGDGGG 120
  121 VIGALLTYGA LKSLGLVGTY LLLLTLILIG FLLILDLSFK EFMQNLIGGL NKIKAFVVES 180
  181 IFPLFIEEEE LKPKKQRKEP VIIEMPPPPE PVFNFQSESF PVHVEAEERA AQKEKENKKT 240
  241 IKENDENITS FEQLSLKDFE KYQLPPISLL NRPKSSRNQM NRDISENIKI LEETLESFGV 300
  301 QATVKEVSCG PAITRYELEP APGVKVSKIV SLADDIALKL AAADVRIEAP IPGKAAVGIE 360
  361 VPNKEINMVV LREIIETPEF QNQASPLAFA LGKDIAGKPI VADLQKMPHL LIAGATGSGK 420
  421 SVCLNTLISS ILFRATPQEV KFLMIDPKMV ELVTFNGIPH LISPVVTNAK KAAISLRWAV 480
  481 REMERRYELF AKYGVRDITR FNSLVLTKGG EDLSYLPYIV IIIDELADLM MVSPAEVEDS 540
  541 ICRLAQMARA AGMHLVVATQ RPSVDVITGL IKANIPSRIS FAVSSQTDSR TILDMAGAEK 600
  601 LLGKGDMLFF PVGASKPIRV QGAYMSDKEV EAVVEFWKKQ GDPEFSSEFE QELDVEEDSQ 660
  661 LEEDELLPQA VKIVMDAGHA SISLLQRRLR IGYARAARLI DQMERKGIVG GYEGSKPRSV 720
  721 LISYEQYKEM FKDL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle