YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77995250, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIGLLLLFL VNLIVLFLVE GKLLSILEGI FLAALGYIIF GAFIKEVNNK FKLLEEFTSK  60
   61 WRQGQYSKVS YYNDKELGKI VDNVNHLIEQ LENCKRAINE GEKRLTAILA GIKAGVMVLD 120
  121 RDGRVILVNK GLENLFGKLN FTGEPKPLLE VIRNYELEKF LKEALANLKE MTREIEFLLP 180
  181 NSKTILIHVT PLKDEHDQKV GLVAVFDDIT EERKLEKMRS EFIANVSHEL RTPLTSIKGF 240
  241 LETLLDGALE DKTIAKHFLQ IMNSETERLT RLIDDLLSLS KIEAKKVDFA PKPLMLQELI 300
  301 QKMKLLFKSR LEEKELSFII SLPENLPLVL ADGDMISQVL INLIDNAIKY TPAGGKIEVT 360
  361 AAVKGSWVEV VVKDTGIGIP EESQKRIFER FYRVDKARSR ELGGTGLGLA IVKHIIELHN 420
  421 GKVWVKSKVG EGSAFGFTIP IAQTVQKEE

Type	Start	End	Confidence
Signal Peptide	1	21	0.89
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	449	0.97