YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GPDA_CARHZ
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSIKVTVLG AGSWGTALSN LLAQKGVNTV LWGRDSAVIE EINRERENKR YLPGVKISQE  60
   61 LIATADLEFA LKDANFLVAA VPSQAFRDLL QKIKPYFKPE QILVNTAKGI EEGSLLRMSA 120
  121 VFTEVLPEYR DNYTILSGPS HAEEVGRGIP TAIVVSGYSP EKLYKVQELF STEYFRVYTN 180
  181 DDLTGVELGG SLKNIIAIAS GICTGLGLGD NTRAALVTRG LIEITRLGIK LGAKKETFMG 240
  241 LSGLGDLFVT AGSRHSRNYK AGILIGEGKS LEETQKEINM VVEGIRTTRA AYQLAQRLEV 300
  301 EMPITEALYK VLFAGLPPRE GLFGLMTRAK KEELNF

Type	Start	End	Confidence
Signal Peptide	1	23	0.94
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	336	0.99