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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78043110, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMHEIKLSQK LMLGMGVVIG FFSLLAFIWN VAETRYSYQK ELLEKARVIT SGLVATRRVI  60
   61 AENQDKINYD SQGHFEFKHL NPAAVGRQVA KYFNQTTGYR LKQTRLKYRN PENAPDPVEK 120
  121 EMLKELAANP QKQELYRNIE RDGHRYFYYM KPLYIEEPCL DCHGEPVGVK DIAGYPKEGY 180
  181 KLGDFAGAIS LVVPADNLQV EFERKLKGNF LLFLAFLGTI GLFSFTVIKN TIEEPLKEIV 240
  241 AMTGEVATGN FKTKVIETNS REIKELSENF HQMAQKLKEL YHNLEEKVRE RTHELSLANE 300
  301 ELARANAFKS EIIAMVSHEL KTPLTSILAF GEILLADSEN LLPWQKEYLE DIMESGQELL 360
  361 KQIETLLTMA KIEAGKITVT YSPVNLQQFL EQCFKFYKNK ARSRRVSLKI KTNITGILIT 420
  421 DEHKLKLILG NIIGNAIKFT PPGGKISVGL RKIFGRLYIY VKDSGPGIAP EDLPNIFNKF 480
  481 WRKDQKVDGT GLGLTLAKDL CELLGYEIKV KSKLGRGSSF YIVIKEGFSD V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle