YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77995220, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKYGIVAII SILVVALLFA GGCAKKNEQA TPQNGQTTKE GKITLAGSTA LLPLAKQAAT  60
   61 LYMEKNPKVT VNVSGGGSFT GLRQVIAGAV DIGNSDVDAE KDPETAGKGL VDHQVAVAPF 120
  121 VIIVNPDVKV DNLSKEQLAD IFTGKITNWK EVGGNDAKIT IIHRAKSSGS RKVITDLVLD 180
  181 GKEFTDKAII QDSNGAVRKA ISQTPGSIGY IDAAYIDNSV KVLKYNGVEY TPENVYNKKY 240
  241 TLYAYEHMYT KGEPTGVVKD FLDFVLSDEF QNNYVEKLGF LSISKMK

Type	Start	End	Confidence
Signal Peptide	1	24	0.98
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	287	0.99