YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78043072, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKFLEVLNT RRSIRKFLDH PVEKEKILKI LEAGMNAPSA GNEQPWHFVV VTDRQKMLAM  60
   61 KEKHPYAAML AEAAAAIAVV ADPKLLKYPG PGQELWIQDL SAATENILLA IHALGLGGVW 120
  121 LAVHPFEERE REIAKILEIP EGYRILNLIA LGYPNQKPDT TTRFKEERIH WEKW

Type	Start	End	Confidence
Cytoplasmic	1	63	0.89
Transmembrane Helix	64	86	0.75
Non-Cytoplasmic	87	105	0.85
Transmembrane Helix	106	124	0.86
Cytoplasmic	125	174	0.86