YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78043028, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIKKAIIPA AGLGVRFLPA TKAQPKEMLP IVDKPTIQYI VEEAVASGIE DILIVTGKNK  60
   61 RAIEDHFDKS PELEMYLEKR GKEDLLEIVR SIGNMVDIHY VRQKEPLGLG HAIYCARKFI 120
  121 GNEPFAVLLG DDLMKARTPV LKQMIDLYEK VEASIVAVQA VEPREVSKYG IIKAEEVGER 180
  181 LYRVYDLVEK PKPEEAPSNL AVMGRYIIEP EIFEFLEKTP PGAGGEIQLT DALRMLCQVK 240
  241 PIYGYVYEGL RYDVGDKLGF LKATVEFALD REELAQGFKA YLKELVEKEI K

Type	Start	End	Confidence
Signal Peptide	1	23	0.95
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	291	0.99