YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78042982, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFCVLISFF FLLTLILVFN QKGLFTLSIK NSKKSKILKK ILSFNRLTYL YFTILDNSPN  60
   61 IIIAIDKNNK VIFLNSRAEE VFGITKEEIL GKNYEIFFQK FGVLERSILM DSLKYKKTFE 120
  121 VENYPIEVKN CVKRFWGKSY PLFGPKGEIS GAVLVLWDTK DKQILTRELI NQEKFSVVKT 180
  181 IATGTAHEIR NPLTTVKGFI QLLGQEKLND PESKVFLNTV LQEINRIEKI ISELLILGSD 240
  241 KGLKKTFFNL NYLIEKVVEN FTPTAYLNNI SIVKNLAKEL PLFYGDEESL YLAITSILNN 300
  301 AFEALQKDGV IVIETFYEHG SNEIGLRIAD NGPGIPEELR SKIFEPFFTT KPEGTGLGLA 360
  361 ICYRTIEEHG GEIRVYNNET GGATFEITLP LPLENAHTQN SANCAG

Type	Start	End	Confidence
Signal Peptide	1	20	0.96
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	406	0.99