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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77995020, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKWLLVSLL VFTLLFFIGT IAVGSYIYYC LKDVPSFSPK MLELSGTTLI FDKDNNIIAE  60
   61 VHGSENRIPV KIKEVPEVVK KAIIGAEDAR FYQHHGIDLK AILRAALEDL KYGAPKEGAS 120
  121 TITQQLVKLT FLTSEKTLKR KIQEAYLAIQ LERAFTKDEI LEMYLNRSYF GEGAYGIKAA 180
  181 AQTYFGKDLD ELTLSEAALL AGLLPAPSRY SPLNNKELAL NRRNIVLNKM VRAGLITEDQ 240
  241 ARKAKSEPLI LNPNLIDKSH HKYKYPYFVE YVIEQLTEKF GSDRVFRGGL RVYTTLDPKI 300
  301 QEAAEKALSD PKNFPKSKRD KDGILQPQGA VVVLDPKTGE IKAIVGGREH NQLRQWNRAT 360
  361 RTKRQPGSAF KPIIAYGPAI ENGMSPATVI DDRPIKYGKH SFVNSNGKYR GLITLRTALT 420
  421 YSVNTVAVQL LDKVGFAEAF KFAKKLGIEL NPKLESNLGV ALGGLTDGVT PLQMAAAYGA 480
  481 FANNGIYVEP SAIIKVESAT GEILYENKPK KRIAMKPETA FMITSMLEDV IFKPGGTGSA 540
  541 ARLDRPVAGK TGTTDEGKDL WFVGYTPDLV AAVWVGHDKP QPIPGGFGGI YPARIFKAIM 600
  601 TEALKGVPKS DFEKPNGIIK ATVCGKSGLL PSSDCPQNQL VYDYFAKGTV PTKICNVHVK 660
  661 AEICADSHLL ATEYCPNKLT VSLIDLPYEV PSYVLDYSLR LPKEKCNIHG PGSQSSTQEV 720
  721 EVPICTDPSH NGQDFLALIP KAGESGGCPP QYVTVKKFPK DKVPKVYCDI PEHQIKPAQG 780
  781 NDNQTTPPGN NQTTPPNN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle