YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78042876, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METRELVIIG GGPAGLAAAI YGARAALNPL VLERGVPGGQ AATTEWIENY PGFEDGIGGF  60
   61 ELMVHMQRQA EKFGAEFKNA DVTGIKKENG VFILNTSTGE IAAKTVIIAT GAEPKELGVP 120
  121 GEREFRGRGV SYCATCDGNF FRGKTVAVVG GGDSALEEAI YLTKLVEKVY LIHRRDGFRA 180
  181 AKVIQERAKA NPKIEFVLNT VVEEIAGERK VEKVIVKNVQ TGEKSEILVD GVFIYVGLKP 240
  241 NTAFLEGFLE LENGYIKTDE NMATAIPGLF AAGDVRLKDL RQVVTAVADG AQAAVAAEKY 300
  301 LEGNK

Type	Start	End	Confidence
Signal Peptide	1	25	0.65
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	305	0.99