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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77994937, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.92
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKGVRVIF GIILFIASFL VLAANPALAR EKVIVVGDND YPPLCYLDGN NNPAGFDVDL  60
   61 IVAVARKAGI DIEIKLLPWA EARKMVEDGK ADVLLGVNYT RTRAKLYDFT EAYLENRQVI 120
  121 FVRSDNYVVK SFDDLRNLKV GVQRADVALD FIGDYPDITL EYFENQQQAL KALGQNEVDA 180
  181 VIGNYYTGLY WLQKLNLENK IKVVGIPLSI TRYGLGVKKG QNQELLKKLN GAIVKLKTTG 240
  241 ELDSLKTKWF GESPYEKRLY FNRIRTYVIV GIFIFTTILL FILWLNRLLQ QKVERATYEL 300
  301 NLAYRELAAQ KDLMDKMLEH ELNGIITLDE NRIIKRINNS ALRILGITDK QLEGKHFSFT 360
  361 PLKDYFPEPF LERAYRGQTC SLNEYRVVVE GQTKFLSINF ISIPSIRAVL INFRDVTEEK 420
  421 KSLELMINRD KLITVGQLVA GFVHEIKNPL FTVKSYLELL PLKANDPAFR EEVINILKNE 480
  481 LDNVQKLIND LLNYARPQNS KKEIVVLEEV IAPLLNLLEP QFIAKQITVF KENLGFAVYA 540
  541 DPMQLRHVFM NLLLNAIDAI QDKGEIKIKA AEYGDKIKIE VQDTGIGIPP QYLNQIFNLF 600
  601 FTSKKDGNGI GLAICQKLIQ ENGGSILVDS TPGAGTTFTI FLPKGVPLTV QDEKVG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle