YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77994808, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKFSRNIFI AVLVLFLVFA LVACGSKQEG EKKTEPIVIK FSHVVAETTP KGQAALKFKE  60
   61 LAEQKTGGKV KVEVYPSSQL FGDKEELEAL IANNVQFIAP SVTKLVGLNP QFQIVDIPFL 120
  121 FKSEEAALKF YQGPAGQKLL KSLEDKGIIG LAWWPNGAKH FTNSKRPLRR PEDFKGLKFR 180
  181 TQSGGVLEEQ FKLLGAGSQT IPFGEVYTAL QNKTVDGQEN TFNNIDTQKY AEVQKYLTVS 240
  241 GHGRLDYVVL TNKTFWDSLP EDIKKALEEA LAEATEYEIK LSTELNQKSM ENLKKSGKLE 300
  301 FYYLTPQDRE AFIKVFEPLY KKYESIIGKE IMDAARNAE

Type	Start	End	Confidence
Signal Peptide	1	25	0.98
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	339	0.99