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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78042637, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAITRREFLK LSALSTAILM TAELGLDNSK AYAQAQKYRI KTAKKTPTLC PFCSAGCGML  60
   61 AYTDTKTGEL LYVVGDPDHP VNRGGACSKG ASIYQIRNIA PGKPNPKRLT KPLYRAPGSK 120
  121 EFKEVTWEWA ISEIAKRIKD TRDRTFIKEE DGITVMRTDH IACLGGAALD NEETYLLQKL 180
  181 MRGLGVVYIE HQARLUHSST VAGLAPTFGR GAMTNHWIDL KNTDCALIIG ANPFENHPVS 240
  241 AKWLMEAKLK RGAKIISVDP RFTRTSSKAD IYAPLRAGTD IAFIGGMINY ILENELYDHD 300
  301 YVANYTNASF IVHDDYKFTD GLFSGYDPRE RKYDFSTWEY KKNEKGEIEK DPTLKHPRTV 360
  361 FQLLKQHFSR YTIDKVCEIT GTPREIYLEV IKTFAETSQK GKSGTIMYAM GGTQHSCGSQ 420
  421 IVRSYAILQL LLGNVGVPGG GVNALRGESN VQGSTDFGLL SNNITGYINS PIAQPEHKDL 480
  481 KAYLESETPK TGFWSNKPKF FISYLKAMYY DKATKENEFG YQWFPKRHPK KNYTYIGLFE 540
  541 NLAKGEIEGM LLFGQNPIVG GPNSNREREA LKNLKWMVAV DLFMTETMRF WTKEAGSNPE 600
  601 EVQTEVFVLP AAASFEKQGS ITSSGRWIQW RWKAVEPLGE SKADLDIIHM LALELKKLYA 660
  661 SSQRPEDEPI KNLYWNYGNT NECDIDRVAR EINGIDLTTG KQVENFLKLA DDGSTLCGNW 720
  721 IFSGFYPEAG NLAQRRELED PSGLGLYPNW TYAWPLNRRI LYNRASADPS GKPWHPDKAV 780
  781 IWWDESQKKW VGYDVPDFKA TIGPDDPAFV NPFIMQTDGK GWLFVPQGKL KDGPFPEHYE 840
  841 PWESPVQNLL SSVQNNPVIK IWRPEEQSDA QNYPYIATTY RVSEHWQAGA MTRNLPWQAE 900
  901 LVPEMFVEIG EELARELGVK SGDEVIVENK RGSIKVKAYV TKRMKPLMVN GIKRHQVGLP 960
  961 WHFGFEGLVT GEIANKLTPY LGDANTMIPE YKGFLVNVRR AK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle