YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77970905, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKTMRSRVV AGAVACAMSI APFAGTTVAM TLATTHAAMA ASSPADGYTA TRYPIILVHG  60
   61 LSGTDKYAGV LEYWYGIQED LQQNGATVYV ANLSGFQSDD GPNGRGEQLL AYVKTVLAAT 120
  121 GATKVNLVGH SQGGLTSRYV AAVAPDLVAS VTTIGTPHRG SEFADFVQNV LAYDPTGLSS 180
  181 SVIAAFVNVF GILTSSSHNT NQDALAALQT LTTARAATYN QNYPSAGLGA PGSCQTGAPT 240
  241 ETVGGNTHLL YSWAGTAIQP TLSLFGVTGA TDTSTIPVVD PANALDLSTL ALYGTGTVMI 300
  301 NRSSGQNDGL VSKCSALYGK VLSTSYKWNH LDEINQLLGV RGAYAEDPVA VIRTHANRLK 360
  361 LAGV

Type	Start	End	Confidence
Signal Peptide	1	33	0.91
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	364	0.98