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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77966655, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNNMFSKAA VWLVIALVLF TVFKQFDKPR VQEGVSYSQF MDDAKNGKVK NVIVQGRNLT  60
   61 VTPADGQKYQ IVSPGDIWMV GDLMKYGVQV SGKADDEPNA LMSALYYLGP TILIIVFWFY 120
  121 MMRQMQGGGK GGAFSFGKSR ARLIDENNNA VNFSDVAGCD EAKEEVSELV DFLRDPQKFQ 180
  181 KLGGRIPRGV LLVGPPGTGK TLLARAIAGE AKVPFFSISG SDFVEMFVGV GAARVRDMFE 240
  241 QAKKHAPCIV FIDEIDAVGR HRGAGMGGGN DEREQTLNQM LVEMDGFEAN SGVIVIAATN 300
  301 RSDVLDKALL RPGRFDRQVY VGLPDIRGRE QIMRVHLRKV PIANDVDAAV IARGTPGFSG 360
  361 ADLANLVNEA ALFAARRGKR IVEMQDFEDA KDKIFMGPER KSAVIREEAK RATAYHESGH 420
  421 AVVAKLLPKA DPVHKVTIIP RGRALGVTWQ LPEHDNETYS KDYLLDRLAI LFGGRVAEEL 480
  481 FMNLVSTGAS DDFNKATQTA RAMVARFGMT DALGPMVYVD DENDASPFGR GFTRTISEAT 540
  541 QQKVDSEIRR VLDEQYSLAR RLLDENRDKV EAMTAALMEW ETIDADQIND IMEGRPPRSP 600
  601 KSSPAVGGDS SGGGSSAEVK PGNAPAPASP AA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle