YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71273786
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTWSNLNLQ NSASPLMEQL IFFHDHALLI LVMITVFVGY LMFMLFFNKY TNRYLLHGQT  60
   61 IEVIWTILPA IILLFIAFPS LRLLYLLDEI NEPSITLKSI GHQWYWSYEY SDFLNVEFDS 120
  121 YMIPTNELAN DGFRLLDVDN RVVLPMNSQI RILVTAADVI HSWTVPALGV KVDGTPGRLN 180
  181 QTNFFINRPG LFYGQCSEIC GANHSFMPIV IESVPVNHFI NWINNSN

Type	Start	End	Confidence
Non-Cytoplasmic	1	20	0.50
Transmembrane Helix	21	47	0.83
Cytoplasmic	48	60	0.42
Transmembrane Helix	61	86	0.79
Non-Cytoplasmic	87	227	0.50