YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|187951153, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALRRLLLLL VAALKLTETR AGSHSLRYFT TAVSRPGLGE PRFIIVGYVD DTQFVRFDSD  60
   61 AENPRMEPRA PWMEQEGPEY WERNTQVSKE NEQSFRVSLG TALSYYNQSK GGSHTLQWLV 120
  121 GCDLGPDGSL LRGYEQSAYD GRDYLALNED LITWTAADLA ALKTRSKLEQ AGLAEKRRAY 180
  181 LEVDCLTWLR RYLELGKETL LHTDPPKAHV THHPSSQGDV TLRCWALGFY PADITLTWQL 240
  241 NGEDLTQDME LVETRPSGDG TFQKWASVMV PFGEEPRYTC HVEHEGLPEP LTLRWEPPPS 300
  301 TDSYMVIIAV LVVLGAVIII GAVVAFVMKR GRNTGGKVRD YAQDPGRDSP QSSDISLLEL 360
  361 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle