YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77748305, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAVLSDTVD TEDLLKFEKK YLAERQIGSL SKGTQFEYAW CLIRSKYNDD IKKGTRILED  60
   61 LLPKGNKEEQ RDYLFYLAVA HYRLKEYEKA LKYVRTLLSA EPKNNQALDL EKVIEKAMQK 120
  121 DGLVGMAIVG GVALGVAGLA GLIGLAISKS K

Type	Start	End	Confidence
Cytoplasmic	1	122	0.88
Transmembrane Helix	123	147	0.90
Non-Cytoplasmic	148	151	0.83