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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77748025
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFEEGLNGR ADKNFSKMGK KSKKEKEKKP AVGIFGMFRY ADWLDKLCMA LGTLAAIIHG  60
   61 TLLPLLMLVF GYMTDSFTQA ETRILPSVTN QSEINSTQTV SDSSLEEDMA MYAYYYTGIG 120
  121 AGVLIVAYIQ VSLWCLAAGR QIHKIRQKFF HAIMNQEIGW FDVHDAGELN TRLTDDVSKV 180
  181 NDGIGDKLGM FFQSITTFSA GFIIGFISGW KLTLVILAVS PLIGLSSAMW AKVLTSFTNK 240
  241 ELQAYAKAGA VAEEVLAAIR TVIAFGGQKK ELERYNKNLE EAKRVGIKKA ITANISIGIA 300
  301 YLLVYASYAL AFWYGTSLVL SNEYSIGQVL TVFFSILLGT FSIGHLAPNI EAFANARGAA 360
  361 YEIFKIIDNE PSIDSFSTKG HKPDSIMGNL EFKNVYFNYP SRSEVKILKG LNLKVKSGQT 420
  421 VALVGNSGCG KSTTVQLLQR LYDPIEGEVS IDGQDIRTIN VRYLREIIGV VSQEPVLFAT 480
  481 TIAENIRYGR ENVTMDEIEK AVKEANAYDF IMKLPHKFNT LVGERGAQLS GGQKQRIAIA 540
  541 RALVRNPKIL LLDEATSALD TESEAVVQAA LDKAREGRTT IVIAHRLSTV RNADVIAGFD 600
  601 GGVIVEQGNH EELMKE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle