YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|70663494
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADDRASPST QQPSARRPTV VLLLWLALAF CLAVLFIQSS FTSPSAPHAR TLDSPDQPST  60
   61 EASRPDLDSN QVRELSGFQS RVQQCVASRG LGLTADIVDH CKLVLKFPEG TNSTWYNAQF 120
  121 KLFEKLAYEY DVCETILLWE QYRNMTTVLT REYLDVRPDG WLDYAPKRIA QLGAKKCYNR 180
  181 TLCEELLSIL LPAKPPFHPR QFATCAVVGN SGDLLKTEFG QEIDAHDAVF RDNEAPVNKK 240
  241 YAKYVGLKRD FRLVVRGAAR NMAPILKGSS DEALIIKSLT HKEINAVIKE LPNPVYLFQG 300
  301 IVLRRGAKGT GMKSVELALS MCDIVDIYGF TVDPGYTEWT RYFSAPRKGH NPLQGRAYYQ 360
  361 LLECLGIIRI HSPMRAQRVE DWSDVPSREE IRSAHAAAFR LKRRETGQAD EPGPFSNCKV 420
  421 WGTVDPDYGP VSGTLDMSET RRN

Type	Start	End	Confidence
Signal Peptide	1	42	0.63
N-region	1	33
H-region	34	39
C-region	40	42
Cleavage Site	42	43
Non-Cytoplasmic	43	443	0.99