YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|70663490
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRILQLGLFL ALASGFAAIS IYITGLSDPF VYPSYHLTDE DTQALLSLHD TFQKCVSANG  60
   61 LGLKATRGTD YCQTTINFPS DTIPKWKDPK TGELEALSFD FNLCEAVATW EQVRNSTTIL 120
  121 TKEFIDSLPN GWEEYAWRRI NKGIQLNRCE NKTLCMEKLS LVLPETPPYF PRQFGRCAVI 180
  181 GNSGDLLKTK FGNEIDGYEV VIRENGAPTQ NYTDYVGRKS TFRLLNRGSA KALDKVVELD 240
  241 EQRKEVLIIK TTIHDIMNKM IREVPIKNPV YLMLGASFGS AAKGTGLKAL EFALSMCDSV 300
  301 DMYGFTVDPG YKEWTRYFSE SRQGHTPLHG RAYYQMMECL GLIKIHSPMR ADLNRVVKWV 360
  361 PSRHIIRSAR IASEKLLRRV GAGSEDPLAA CSIIKKQVKR NLNAVSKLRK AALDHLRYVK 420
  421 RTTMYPLEHS PGHGSLCTVP TD

Type	Start	End	Confidence
Signal Peptide	1	17	0.98
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	442	0.99