YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|213627187, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLVVLCGFP CSGKSSRSQE LQEHLEQSGR KVHIIGDHVL GVDRNAVYAD SKKEKELRGS  60
   61 LRAAVERKLN KEEVVILDSP NYIKGYRYEL FCLIKHVQTP HCLIHCITAP EISSTWNQNR 120
  121 DKNEQYNQEI FDALVQRFEF PDSRNRWDSP LFTVHKDEKL PLEQICNAIF HRKAPPPNQS 180
  181 TQMQPLSSTN FLHELDKVTQ EVVTTVLNAQ KTSVPGDVIM VPGASEKVQL PRILSMSELR 240
  241 RLRQQFISYT KLHPNENISQ LANMFVQYLN QSIH

Type	Start	End	Confidence
Signal Peptide	1	18	0.64
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	274	0.99