YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|171847245, gi...
Protein type:	Transmembrane
Type Confidence:	0.65
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALGRLSGI LRGSLPSRGR LFSAAASEQE HAGAVRTWKI LTYVVALPGV AVCMLNAYLK  60
   61 MQHHSHENPE FIPYEHLRIR TKKFPWGDGN KSLFHNAHVN ALPNGYEESE H

Type	Start	End	Confidence
Cytoplasmic	1	39	0.48
Transmembrane Helix	40	59	0.63
Non-Cytoplasmic	60	111	0.83