YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62857951, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MICVLPGLYL GSASDAADQQ RLQEAGITHV LTVDSEAPTG LDGFITKFVH VLDDASQDLL  60
   61 SCLPACTDFL KEALGKCGRS VLVHCHSGVS RSAAVIAAYL MHTSNLSLED ACSRLQVLKS 120
  121 DIRMNEEFLG QLSLYETMGC DVDMTCASYK QYRLQKVTEK YPELLKLPQE VFASDPCSMA 180
  181 QTAEVLYRCR KCRRSLFRET SILNHALGTG AAAFAHKRPP SLQKVDSTKC TSYFVEPVQW 240
  241 MEEALLGVMD GQLLCPKCSS KLGSFNWYGV QCSCGRWVTP AFQIHKNRVD EAKTLHIRGI 300
  301 QQSDT

Type	Start	End	Confidence
Signal Peptide	1	16	0.54
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	305	0.98