YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62859799, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAVGLRAT YHRALDRIEM MLPSKLRPLY NHPAGPKTVF FWAPIMKWGL VIAGLADMTR  60
   61 PAEKLSTGQS AVLTATGLIW SRYSLVIIPK NWSLFAVNFF VGCAGGSQLF RIWRYNQDLK 120
  121 AKGIEVNQEV KP

Type	Start	End	Confidence
Non-Cytoplasmic	1	37	0.45
Transmembrane Helix	38	56	0.58
Cytoplasmic	57	64	0.60
Transmembrane Helix	65	86	0.62
Non-Cytoplasmic	87	91	0.71
Transmembrane Helix	92	113	0.83
Cytoplasmic	114	132	0.79