YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89273761, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKLKKVLSG QDNEERNGFE EVIETSSLSW GTRIKGFIAC FVIGVACSIL GTCLLWVPGK  60
   61 GLALFAIFYT IGNVSSLGST FFLMGPLKQL KKMFEMTRLI ATIVMLLCLI LTLCAALWWK 120
  121 IKGLALLFCI LQFFAMAWYS ISFIPFARDA VKKCFSTCIS

Type	Start	End	Confidence
Cytoplasmic	1	35	0.98
Transmembrane Helix	36	57	0.94
Non-Cytoplasmic	58	64	0.75
Transmembrane Helix	65	85	0.95
Cytoplasmic	86	98	0.81
Transmembrane Helix	99	119	0.94
Non-Cytoplasmic	120	123	0.86
Transmembrane Helix	124	146	0.89
Cytoplasmic	147	160	0.96