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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62858237, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.94
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVWLPPGTRS PLQLCRSVGL IVLSLLWIVC AVGAGEQGFS AEMWLQKYGY LPPTDPRMSV  60
   61 LRSAETMQSA IAAMQQFYGI NATGKIDKNT IDWMKKPRCG VRDQAGPISR FNVRRKRYAL 120
  121 TGQKWHHKHI TYSIKNVTPK VGDSETRKAI RRAFDVWQNV TPLTFEEVPY CELENGKRDV 180
  181 DITIIFASGF HGDSSPFDGE GGFLAHAYFP GPGIGGDTHF DSDEPWTLGN PNHDGNDLFL 240
  241 VAVHELGHAL GLEHSNDPTA IMAPFYQYME TDNFKLPTDD LQGIQKIYGP PEKAPAPTKP 300
  301 LPTVPPHRSV PPVDPRKNDR QPKPPRPPTG DKPSYPGAKP NICDGNFNTL AILRREMFVF 360
  361 KDQWFWRVRN NKVMDGYPMQ ITYFWRGLPP GIDAVYENRE GNFVFFKGNK YWIFKDTTLQ 420
  421 PGYPYDLMHL GHGIPPHGID TAVWWEDVGK TYFFKGDRYW RYNEEMRVMD PGYPKLITVW 480
  481 KGIPESPQGA FVDKENGFTY FYKGKEYWKF QNLNLRVEPG YPRSILKDFM GCDGSTDGDK 540
  541 ERTSPQDDVD IVIKLDNTAS TVKAIAIVIP CILALCLLVL VYTVFQIKRK GTPRHILYCK 600
  601 RSMQEWV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle