YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CISY_XENTR
Protein type:	Globular with Signal Peptide
Type Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLITAGRLC ARILGAKNSP CALIAARQAS SSANLKDVLS DLIPKEQTRI KNFRQQYGKN  60
   61 VIGQITVDMM YGGMRGMKGL VYETSVLDPD EGIRFRGYSI PECQKLLPKA PGGEEPLPEG 120
  121 LFWLLVTGEA PSQEQVNWIS KEWAKRAALP SHVVTMLDNF PTNLHPMSQL SAAITALNSE 180
  181 SNFARGYAEG VNKTKYWELI YEDSMDLIAK LPCVAAKIYR NLYREGSSIG AIDSNLDWSH 240
  241 NFTNMLGYTD PQFTELMRLY LTIHSDHEGG NVSAHTSHLV GSALSDPYLS FSAAMNGLAG 300
  301 PLHGLANQEV LVWLTSLQKD LGGEVSDEKL RDYIWNTLNS GRVVPGYGHA VLRKTDPRYT 360
  361 CQREFALKHL PNDPMFKLVA QLYKIVPNVL LEQGKAKNPW PNVDAHSGVL LQYYGMKEMN 420
  421 YYTVLFGVSR ALGVLAQLIW SRALGFPLER PKSMSTDGLM QLVGSKSG

Type	Start	End	Confidence
Signal Peptide	1	31	0.73
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	468	0.96