YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89272063, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADQKEVKYY TLEEIKQHNH SKSTWILIHN KVYDVTKFLE EHPGGEEVLR EQAGGDATET  60
   61 FEDIGHSTDA RNMSKEFIIG ELHPDDRSKI QKPTETFITT TDSDSSWWSN WIIPGISAFI 120
  121 VALMYRFYMA SE

Type	Start	End	Confidence
Cytoplasmic	1	106	0.54
Transmembrane Helix	107	129	0.88
Non-Cytoplasmic	130	132	0.52