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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77546227, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRRKFLQIM GLVSGATLLS SCGSDRNQKE LISYLVPPED GVRPGTSAWR VSTCSECPAH  60
   61 CGIMIRLREK RAVKLEGLPD HPINRGALCM RGQAALWRLY HPERLRTPLL RKGNDYQAVS 120
  121 WEVALEHIVQ AMSDRQRSHM LLSGATTGSL AALQEQFVAA CKVTRLPEFE LFSHAALRQA 180
  181 YQLLYGRSTL PYFRIEDADL LLSVGADLLE TFSSPAGYAQ KLSEARRDHD LHWCHIEPHL 240
  241 SLTGANADQR LSIKPAGEPA LLLWLLQTLV DNRHMPAAIR AALPKISLSQ AGHATGLPPS 300
  301 RLTRLAESLK KARRPLLIVG GIATGHQAGQ QTALFGCLLQ RLLAEPWRGI DFARADKPDR 360
  361 TGDLRDLQTL NQALQRDEVG MLLISRADPL RHAPPDWQLA DNLRRARLSV AMADMHDATT 420
  421 RAVDLILPLT HSFERWDDAE PRNGVYSLIQ PGMTPLYDTR TEGDILLQLQ RRLTGQSATD 480
  481 SYESFLQQRW REQFSTAELR SFLRQGFVTT DTSRTSTPLR IERTVAALRN STLPETLPTP 540
  541 ALVITGSIRS FDGRSAALSL LNEIPDPLTT VTHGTWVALS PRCAQKYGVA DGDQLRLTHG 600
  601 DFHLTLPARL QQGLPDDVFS LPVDCLPAGL PDFDPATGEA LRTIGPVKAR RVGKKIPLPI 660
  661 LSGSPSQQGR GIIPRPIHHD KGHHAEHRSL YPEPAYREYR WAMAIDLRQC IGCGACVASC 720
  721 YVENSVPVVG RKDHLKGREM SWLRVEPFYS DQGQISFIPM LCQHCDYAPC EPVCPVYASY 780
  781 HNPEGLNVQV YNRCVGTRYC SNNCPYKVRR FNWWEHIWAP PLEKMHNPDL APRTRGMMEK 840
  841 CTFCIQRIRA AHEIAGKENR RIRDGEVTPA CAQSCPTAAI TFGNRLDPGS AVARMIESPR 900
  901 AYQVFEGLGT KPAVYYLRPD 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle