YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77545560, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKRPFLMAL FTLGAIFILF LIITLLLSRC TGNFQGLPVG ERIGVVEISG MLMVSEPTVK  60
   61 QLVSFKEDHS IKAVILRVNS PGGAVAPSQE IHDEVARVAA LKPVVVSMAS VAASGGYYVS 120
  121 IPAQRIVANP GTITGSIGVI MQTTNYQELY DKLGLKNEVV KSGQHKDLGS PLRPMTPADR 180
  181 KILQGVIDDV YDQFVSAVSK GRKLPVEKVR TLADGRIFTG RQAMQAGLVD SLGGMQDAVA 240
  241 IASELAGISG EPKLVYPPKD KESLLKYFIE ESVSQVGRAL QQRQQGSPAM QYLWTGRD

Type	Start	End	Confidence
Signal Peptide	1	32	0.81
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	298	0.98